Code

• Xeva - Open-source R software for PDX pharmacogenomics data analysis
  • Xeva package
  • Xeva GitHub
  • link


• Biological and Therapeutic Implications of a Unique Subtype of NPM1 Mutated AML

  • A docker container with data and code to reproduce the results

  • EGAD00001006669: Illumina HiSeq based RNA sequencing data from 91 acute myeloid leukemia patient samples, all harboring mutation in NPM1 gene. Data at the European Genome-phenome Archive (EGA)

  • EGAD00001006670 - ATACseq profiling data from fresh bone marrow and peripheral blood samples obtained from 18 AML patients.

  • FR-FCM-Z36E - CyToF profiling data from peripheral blood and bone marrow samples of AML patients to investigate potential marker expression differences between cells from FLT3-ITD positive and negative samples.